Feature requests / bug reports should be submitted via the official GitHub repository.

Questions should be addressed to: Alessio Milanese, Daniel Mende, Georg Zeller or Shinichi Sunagawa.

Microbial abundance, activity and population genomic profiling with mOTUs2

Alessio Milanese*, Daniel R Mende*, Lucas Paoli, Guillem Salazar, Hans-Joachim Ruscheweyh, Miguelangel Cuenca, Pascal Hingamp, Renato Alves, Paul I Costea, Luis P Coelho, T Sebastian B Schmidt, Alexandre Almeida, Alex L Mitchell, Robert D Finn, Jaime Huerta-Cepas, Peer Bork, Georg Zeller#, Shinichi Sunagawa#.

Nature Communications 10, Article number: 1014 (2019): https://doi.org/10.1038/s41467-019-08844-4

mOTUs: Profiling Taxonomic Composition, Transcriptional Activity and Strain Populations of Microbial Communities

Hans-Joachim Ruscheweyh*, Alessio Milanese*, Lucas Paoli, Anna Sintsova, Daniel R. Mende, Georg Zeller#, Shinichi Sunagawa#

Current Protocols 1, e218 (2021): https://doi.org/10.1002/cpz1.218

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The codebase of the first version of mOTUs can be found here.

mOTUs is published under the GPL-3.0 license.